ECODEvolutionary Classification of Protein Domains

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PDB 6Y66

X-RAY DIFFRACTION1.95 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAACapsid protein VP1view chain

1 domain

e6y66AAA1(AAA:22-286)

Chain BBBCapsid protein VP1view chain

1 domain

e6y66BBB1(BBB:22-286)

Chain CCCCapsid protein VP1view chain

1 domain

e6y66CCC1(CCC:20-286)

Chain DDDCapsid protein VP1view chain

1 domain

e6y66DDD1(DDD:22-286)

Chain EEECapsid protein VP1view chain

1 domain

e6y66EEE1(EEE:22-286)

Chain FFFCapsid protein VP1view chain

1 domain

e6y66FFF1(FFF:22-286)

Chain GGGCapsid protein VP1view chain

1 domain

e6y66GGG1(GGG:19-286)

Chain HHHCapsid protein VP1view chain

1 domain

e6y66HHH1(HHH:22-286)

Chain IIICapsid protein VP1view chain

1 domain

e6y66III1(III:20-286)

Chain JJJCapsid protein VP1view chain

1 domain

e6y66JJJ1(JJJ:19-286)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	AAA	e6y66AAA1	AAA:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
2	BBB	e6y66BBB1	BBB:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
3	CCC	e6y66CCC1	CCC:20-286	Polyoma_coat	10 → 10.2 → 10.2.1
4	DDD	e6y66DDD1	DDD:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
5	EEE	e6y66EEE1	EEE:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
6	FFF	e6y66FFF1	FFF:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
7	GGG	e6y66GGG1	GGG:19-286	Polyoma_coat	10 → 10.2 → 10.2.1
8	HHH	e6y66HHH1	HHH:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
9	III	e6y66III1	III:20-286	Polyoma_coat	10 → 10.2 → 10.2.1
10	JJJ	e6y66JJJ1	JJJ:19-286	Polyoma_coat	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors