ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 6Z5R

ELECTRON MICROSCOPY35 chains36 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain 0Light-harvesting complex 1 beta chainview chain

1 domain

e6z5r01(0:4-52)

Chain 1Light-harvesting complex 1 alpha chainview chain

1 domain

e6z5r11(1:1-46)

Chain 2Light-harvesting complex 1 beta chainview chain

1 domain

e6z5r21(2:5-52)

Chain 3Light-harvesting complex 1 alpha chainview chain

1 domain

e6z5r31(3:1-46)

Chain 4Light-harvesting complex 1 beta chainview chain

1 domain

e6z5r41(4:5-52)

Chain 5Light-harvesting complex 1 alpha chainview chain

1 domain

e6z5r51(5:1-46)

Chain 6Light-harvesting complex 1 beta chainview chain

1 domain

e6z5r61(6:3-52)

Chain 7Light-harvesting complex 1 alpha chainview chain

1 domain

e6z5r71(7:1-46)

Chain 8Light-harvesting complex 1 beta chainview chain

1 domain

e6z5r81(8:4-52)

Chain 9Light-harvesting complex 1 alpha chainview chain

1 domain

e6z5r91(9:1-46)

Chain ALight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rA1(A:1-46)

Chain BLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rB1(B:4-52)

Chain CLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rC1(C:1-46)

Chain DLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rD1(D:4-52)

Chain ELight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rE1(E:1-46)

Chain FLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rF1(F:4-52)

Chain GLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rG1(G:1-46)

Chain HH subunit of photosynthetic reaction center complexview chain

2 domains

e6z5rH1(H:1-32)e6z5rH2(H:33-247)

Chain ILight-harvesting complex 1 beta chainview chain

1 domain

e6z5rI1(I:6-52)

Chain JLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rJ1(J:1-45)

Chain KLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rK1(K:6-52)

Chain LReaction center protein L chainview chain

1 domain

e6z5rL1(L:2-277)

Chain MReaction center protein M chainview chain

1 domain

e6z5rM1(M:2-307)

Chain NLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rN1(N:1-46)

Chain OLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rO1(O:5-52)

Chain PLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rP1(P:1-46)

Chain QLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rQ1(Q:5-52)

Chain RLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rR1(R:1-46)

Chain SLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rS1(S:5-52)

Chain TLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rT1(T:1-48)

Chain ULight-harvesting complex 1 beta chainview chain

1 domain

e6z5rU1(U:6-52)

Chain VLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rV1(V:1-46)

Chain XLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rX1(X:6-52)

Chain YLight-harvesting complex 1 alpha chainview chain

1 domain

e6z5rY1(Y:2-46)

Chain ZLight-harvesting complex 1 beta chainview chain

1 domain

e6z5rZ1(Z:5-52)

All Domains (36)

#	Chain	Domain ID	Range	Family	Classification
1	0	e6z5r01	0:4-52	LHC	5074 → 5074.1 → 5074.1.1
2	1	e6z5r11	1:1-46	LHC	5074 → 5074.1 → 5074.1.1
3	2	e6z5r21	2:5-52	LHC	5074 → 5074.1 → 5074.1.1
4	3	e6z5r31	3:1-46	LHC	5074 → 5074.1 → 5074.1.1
5	4	e6z5r41	4:5-52	LHC	5074 → 5074.1 → 5074.1.1
6	5	e6z5r51	5:1-46	LHC	5074 → 5074.1 → 5074.1.1
7	6	e6z5r61	6:3-52	LHC	5074 → 5074.1 → 5074.1.1
8	7	e6z5r71	7:1-46	LHC	5074 → 5074.1 → 5074.1.1
9	8	e6z5r81	8:4-52	LHC	5074 → 5074.1 → 5074.1.1
10	9	e6z5r91	9:1-46	LHC	5074 → 5074.1 → 5074.1.1
11	A	e6z5rA1	A:1-46	LHC	5074 → 5074.1 → 5074.1.1
12	B	e6z5rB1	B:4-52	LHC	5074 → 5074.1 → 5074.1.1
13	C	e6z5rC1	C:1-46	LHC	5074 → 5074.1 → 5074.1.1
14	D	e6z5rD1	D:4-52	LHC	5074 → 5074.1 → 5074.1.1
15	E	e6z5rE1	E:1-46	LHC	5074 → 5074.1 → 5074.1.1
16	F	e6z5rF1	F:4-52	LHC	5074 → 5074.1 → 5074.1.1
17	G	e6z5rG1	G:1-46	LHC	5074 → 5074.1 → 5074.1.1
18	H	e6z5rH1	H:1-32	PRCH	5002 → 5002.1 → 5002.1.1
19	H	e6z5rH2	H:33-247	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
20	I	e6z5rI1	I:6-52	LHC	5074 → 5074.1 → 5074.1.1
21	J	e6z5rJ1	J:1-45	LHC	5074 → 5074.1 → 5074.1.1
22	K	e6z5rK1	K:6-52	LHC	5074 → 5074.1 → 5074.1.1
23	L	e6z5rL1	L:2-277	Photo_RC	5037 → 5037.1 → 5037.1.1
24	M	e6z5rM1	M:2-307	Photo_RC	5037 → 5037.1 → 5037.1.1
25	N	e6z5rN1	N:1-46	LHC	5074 → 5074.1 → 5074.1.1
26	O	e6z5rO1	O:5-52	LHC	5074 → 5074.1 → 5074.1.1
27	P	e6z5rP1	P:1-46	LHC	5074 → 5074.1 → 5074.1.1
28	Q	e6z5rQ1	Q:5-52	LHC	5074 → 5074.1 → 5074.1.1
29	R	e6z5rR1	R:1-46	LHC	5074 → 5074.1 → 5074.1.1
30	S	e6z5rS1	S:5-52	LHC	5074 → 5074.1 → 5074.1.1
31	T	e6z5rT1	T:1-48	LHC	5074 → 5074.1 → 5074.1.1
32	U	e6z5rU1	U:6-52	LHC	5074 → 5074.1 → 5074.1.1
33	V	e6z5rV1	V:1-46	LHC	5074 → 5074.1 → 5074.1.1
34	X	e6z5rX1	X:6-52	LHC	5074 → 5074.1 → 5074.1.1
35	Y	e6z5rY1	Y:2-46	LHC	5074 → 5074.1 → 5074.1.1
36	Z	e6z5rZ1	Z:5-52	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors