ECODEvolutionary Classification of Protein Domains

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PDB 7NHP

ELECTRON MICROSCOPY18 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Photosystem II lipoprotein Psb27view chain

1 domain

e7nhp11(1:22-134)

Chain 2Photosystem II reaction center Psb28 proteinview chain

1 domain

e7nhp21(2:3-114)

Chain APhotosystem II protein D1 1view chain

1 domain

e7nhpA1(A:10-344)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e7nhpB1(B:2-328,B:445-497)e7nhpB2(B:329-444)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e7nhpC1(C:14-445)

Chain DPhotosystem II D2 proteinview chain

1 domain

e7nhpD1(D:12-352)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e7nhpE1(E:8-84)

Chain FCytochrome b559 subunit betaview chain

1 domain

e7nhpF1(F:8-45)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e7nhpH1(H:2-66)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e7nhpI1(I:1-26)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e7nhpK1(K:10-46)

Chain LPhotosystem II reaction center protein Lview chain

1 domain

e7nhpL1(L:1-37)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e7nhpM1(M:1-34)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e7nhpT1(T:1-28)

Chain XPhotosystem II reaction center X proteinview chain

1 domain

e7nhpX1(X:2-36)

Chain yPhotosystem II reaction center protein Ycf12view chain

1 domain

e7nhpy1(y:19-46)

Chain ZPhotosystem II reaction center protein Zview chain

1 domain

e7nhpZ1(Z:2-61)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	1	e7nhp11	1:22-134	PSII_Pbs27	601 → 601.37 → 601.37.1
2	2	e7nhp21	2:3-114	Psb28	1 → 1.11 → 1.11.1
3	A	e7nhpA1	A:10-344	Photo_RC	5037 → 5037.1 → 5037.1.1
4	B	e7nhpB1	B:2-328,B:445-497	PSII	5075 → 5075.1 → 5075.1.1
5	B	e7nhpB2	B:329-444	PSII	3744 → 3744.1 → 3744.1.1
6	C	e7nhpC1	C:14-445	PSII	5075 → 5075.1 → 5075.1.1
7	D	e7nhpD1	D:12-352	Photo_RC	5037 → 5037.1 → 5037.1.1
8	E	e7nhpE1	E:8-84	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
9	F	e7nhpF1	F:8-45	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
10	H	e7nhpH1	H:2-66	PsbH	5032 → 5032.1 → 5032.1.1
11	I	e7nhpI1	I:1-26	PsbI	5035 → 5035.1 → 5035.1.1
12	K	e7nhpK1	K:10-46	PsbK	5034 → 5034.1 → 5034.1.1
13	L	e7nhpL1	L:1-37	PsbL	5030 → 5030.1 → 5030.1.1
14	M	e7nhpM1	M:1-34	PsbM	5033 → 5033.1 → 5033.1.1
15	T	e7nhpT1	T:1-28	PsbT	3390 → 3390.1 → 3390.1.1
16	X	e7nhpX1	X:2-36	PsbX	3493 → 3493.1 → 3493.1.1
17	y	e7nhpy1	y:19-46	PSII_Ycf12	3379 → 3379.1 → 3379.1.1
18	Z	e7nhpZ1	Z:2-61	Ycf9	5044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors