ECODEvolutionary Classification of Protein Domains

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PDB 7YML

ELECTRON MICROSCOPY24 chains24 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ALight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlA1(A:1-44)

Chain BLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlB1(B:5-48)

Chain DLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlD1(D:1-56)

Chain ELight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlE1(E:5-48)

Chain FLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlF1(F:1-54)

Chain GLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlG1(G:6-48)

Chain HPhotosynthetic reaction center H subunitview chain

2 domains

e7ymlH1(H:36-248)e7ymlH2(H:1-35)

Chain ILight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlI1(I:1-56)

Chain JLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlJ1(J:5-48)

Chain KLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlK1(K:1-55)

Chain LReaction center protein L chainview chain

1 domain

e7ymlL1(L:2-282)

Chain MReaction center protein M chainview chain

1 domain

e7ymlM1(M:2-305)

Chain NLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlN1(N:6-48)

Chain OLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlO1(O:1-56)

Chain PLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlP1(P:6-48)

Chain QLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlQ1(Q:1-56)

Chain RLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlR1(R:6-48)

Chain SLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlS1(S:1-56)

Chain TLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlT1(T:6-48)

Chain VLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlV1(V:1-56)

Chain WLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlW1(W:8-48)

Chain YLight-harvesting protein B-870 alpha chainview chain

1 domain

e7ymlY1(Y:12-53)

Chain ZLight-harvesting protein B-870 beta chainview chain

1 domain

e7ymlZ1(Z:18-48)

All Domains (24)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7ymlA1	A:1-44	LHC	5074 → 5074.1 → 5074.1.1
2	B	e7ymlB1	B:5-48	LHC	5074 → 5074.1 → 5074.1.1
3	D	e7ymlD1	D:1-56	LHC	5074 → 5074.1 → 5074.1.1
4	E	e7ymlE1	E:5-48	LHC	5074 → 5074.1 → 5074.1.1
5	F	e7ymlF1	F:1-54	LHC	5074 → 5074.1 → 5074.1.1
6	G	e7ymlG1	G:6-48	LHC	5074 → 5074.1 → 5074.1.1
7	H	e7ymlH1	H:36-248	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
8	H	e7ymlH2	H:1-35	PRCH	5002 → 5002.1 → 5002.1.1
9	I	e7ymlI1	I:1-56	LHC	5074 → 5074.1 → 5074.1.1
10	J	e7ymlJ1	J:5-48	LHC	5074 → 5074.1 → 5074.1.1
11	K	e7ymlK1	K:1-55	LHC	5074 → 5074.1 → 5074.1.1
12	L	e7ymlL1	L:2-282	Photo_RC	5037 → 5037.1 → 5037.1.1
13	M	e7ymlM1	M:2-305	Photo_RC	5037 → 5037.1 → 5037.1.1
14	N	e7ymlN1	N:6-48	LHC	5074 → 5074.1 → 5074.1.1
15	O	e7ymlO1	O:1-56	LHC	5074 → 5074.1 → 5074.1.1
16	P	e7ymlP1	P:6-48	LHC	5074 → 5074.1 → 5074.1.1
17	Q	e7ymlQ1	Q:1-56	LHC	5074 → 5074.1 → 5074.1.1
18	R	e7ymlR1	R:6-48	LHC	5074 → 5074.1 → 5074.1.1
19	S	e7ymlS1	S:1-56	LHC	5074 → 5074.1 → 5074.1.1
20	T	e7ymlT1	T:6-48	LHC	5074 → 5074.1 → 5074.1.1
21	V	e7ymlV1	V:1-56	LHC	5074 → 5074.1 → 5074.1.1
22	W	e7ymlW1	W:8-48	LHC	5074 → 5074.1 → 5074.1.1
23	Y	e7ymlY1	Y:12-53	LHC	5074 → 5074.1 → 5074.1.1
24	Z	e7ymlZ1	Z:18-48	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors