Home/PDB

PDB 8BD3

ELECTRON MICROSCOPY66 chains65 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain 0Chlorophyll a-b binding of LHCIIview chain
1 domain
Chain 1Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 2Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 3Chlorophyll a-b binding of LHCIIview chain
1 domain
Chain 4Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 5Chlorophyll a-b binding of LHCIIview chain
1 domain
Chain 6Chlorophyll a-b binding of LHCIIview chain
1 domain
Chain 7Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 8Chlorophyll a-b binding of LHCIIview chain
1 domain
Chain 9Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain aPhotosystem II protein D1view chain
1 domain
Chain APhotosystem II protein D1view chain
1 domain
Chain bPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain cPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain dPhotosystem II D2 proteinview chain
1 domain
Chain DPhotosystem II D2 proteinview chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit betaview chain
1 domain
Chain FCytochrome b559 subunit betaview chain
1 domain
Chain f1Photosystem II oxygen evolving enhancer 2view chain
1 domain
Chain F1Photosystem II oxygen evolving enhancer 2view chain
1 domain
Chain gChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain GChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein Iview chain
1 domain
Chain IPhotosystem II reaction center protein Iview chain
1 domain
Chain jPhotosystem II reaction center protein Jview chain
1 domain
Chain JPhotosystem II reaction center protein Jview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain MPhotosystem II reaction center protein Mview chain
1 domain
Chain nChlorophyll a-b binding of LHCIIview chain
1 domain
Chain NChlorophyll a-b binding of LHCIIview chain
1 domain
Chain oChloroplast oxygen-evolving enhancer protein 1view chain
1 domain
Chain OChloroplast oxygen-evolving enhancer protein 1view chain
1 domain
Chain pChlorophyll a-b binding of LHCIIview chain
1 domain
Chain qChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain q1Chloroplast PsbYview chain
1 domain
Chain Q1Chloroplast PsbYview chain
1 domain
Chain rChlorophyll a b binding CP29view chain
1 domain
Chain RChlorophyll a b binding CP29view chain
1 domain
Chain sChlorophyll a b-binding CP26view chain
1 domain
Chain SChlorophyll a b-binding CP26view chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain uChloroplast oxygen-evolving enhancer protein 3view chain
1 domain
Chain UChloroplast oxygen-evolving enhancer protein 3view chain
1 domain
Chain vPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain VPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain wPhotosystem II reaction center W proteinview chain
1 domain
Chain WPhotosystem II reaction center W proteinview chain
1 domain
Chain xPhotosystem II reaction center protein Xview chain
1 domain
Chain XPhotosystem II reaction center protein Xview chain
1 domain
Chain yMultifunctional fusion proteinview chain
1 domain
Chain YMultifunctional fusion proteinview chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (65)

#ChainDomain IDRangeFamilyClassification
10e8bd3010:40-256Chloroa_b-bind5077 → 5077.1 → 5077.1.1
21e8bd3111:39-252Chloroa_b-bind5077 → 5077.1 → 5077.1.1
32e8bd3212:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
43e8bd3313:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
54e8bd3414:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
65e8bd3515:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
76e8bd3616:40-256Chloroa_b-bind5077 → 5077.1 → 5077.1.1
87e8bd3717:39-252Chloroa_b-bind5077 → 5077.1 → 5077.1.1
98e8bd3818:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
109e8bd3919:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
11ae8bd3a1a:9-344Photo_RC5037 → 5037.1 → 5037.1.1
12Ae8bd3A1A:9-344Photo_RC5037 → 5037.1 → 5037.1.1
13be8bd3b1b:2-328,b:445-505PSII5075 → 5075.1 → 5075.1.1
14be8bd3b2b:329-444PSII3744 → 3744.1 → 3744.1.1
15Be8bd3B1B:329-444PSII3744 → 3744.1 → 3744.1.1
16Be8bd3B2B:2-328,B:445-505PSII5075 → 5075.1 → 5075.1.1
17ce8bd3c1c:13-460PSII5075 → 5075.1 → 5075.1.1
18Ce8bd3C1C:13-460PSII5075 → 5075.1 → 5075.1.1
19de8bd3d1d:11-352Photo_RC5037 → 5037.1 → 5037.1.1
20De8bd3D1D:11-352Photo_RC5037 → 5037.1 → 5037.1.1
21ee8bd3e1e:2-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
22Ee8bd3E1E:2-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
23fe8bd3f1f:8-44Cytochrom_B5595036 → 5036.1 → 5036.1.1
24Fe8bd3F1F:8-44Cytochrom_B5595036 → 5036.1 → 5036.1.1
25f1e8bd3f11f1:48-235PsbP881 → 881.1 → 881.1.1
26F1e8bd3F11F1:48-235PsbP881 → 881.1 → 881.1.1
27ge8bd3g1g:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
28Ge8bd3G1G:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
29he8bd3h1h:19-85PsbH5032 → 5032.1 → 5032.1.1
30He8bd3H1H:19-85PsbH5032 → 5032.1 → 5032.1.1
31ie8bd3i1i:1-34PsbI5035 → 5035.1 → 5035.1.1
32Ie8bd3I1I:1-34PsbI5035 → 5035.1 → 5035.1.1
33je8bd3j1j:5-42PsbJ5031 → 5031.1 → 5031.1.1
34Je8bd3J1J:5-42PsbJ5031 → 5031.1 → 5031.1.1
35ke8bd3k1k:10-46PsbK5034 → 5034.1 → 5034.1.1
36Ke8bd3K1K:10-46PsbK5034 → 5034.1 → 5034.1.1
37le8bd3l1l:2-38PsbL5030 → 5030.1 → 5030.1.1
38Le8bd3L1L:2-38PsbL5030 → 5030.1 → 5030.1.1
39Me8bd3M011-325033.1.1.05033 → 5033.1 → 5033.1.1
40ne8bd3n1n:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
41Ne8bd3N1N:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
42oe8bd3o1o:52-291MSP5084 → 5084.1 → 5084.1.1
43Oe8bd3O1O:52-291MSP5084 → 5084.1 → 5084.1.1
44pe8bd3p1p:38-258Chloroa_b-bind5077 → 5077.1 → 5077.1.1
45qe8bd3q1q:40-261Chloroa_b-bind5077 → 5077.1 → 5077.1.1
46q1e8bd3q11q1:2-35PsbY6106 → 6106.1 → 6106.1.1
47Q1e8bd3Q11Q1:2-35PsbY6106 → 6106.1 → 6106.1.1
48re8bd3r1r:38-273Chloroa_b-bind5077 → 5077.1 → 5077.1.1
49Re8bd3R1R:38-273Chloroa_b-bind5077 → 5077.1 → 5077.1.1
50se8bd3s1s:33-289Chloroa_b-bind5077 → 5077.1 → 5077.1.1
51Se8bd3S1S:33-289Chloroa_b-bind5077 → 5077.1 → 5077.1.1
52te8bd3t1t:1-30PsbT3390 → 3390.1 → 3390.1.1
53Te8bd3T1T:1-30PsbT3390 → 3390.1 → 3390.1.1
54ue8bd3u1u:71-144601.18.1.0601 → 601.18 → 601.18.1
55Ue8bd3U01125-198601.18.1.0601 → 601.18 → 601.18.1
56ve8bd3v1v:2-33PSII_Ycf123379 → 3379.1 → 3379.1.1
57Ve8bd3V1V:2-33PSII_Ycf123379 → 3379.1 → 3379.1.1
58we8bd3w1w:60-119PsbW1084 → 1084.1 → 1084.1.1
59We8bd3W1W:60-119PsbW1084 → 1084.1 → 1084.1.1
60xe8bd3x1x:64-100PsbX3493 → 3493.1 → 3493.1.1
61Xe8bd3X1X:64-100PsbX3493 → 3493.1 → 3493.1.1
62ye8bd3y1y:40-260Chloroa_b-bind5077 → 5077.1 → 5077.1.1
63Ye8bd3Y1Y:40-260Chloroa_b-bind5077 → 5077.1 → 5077.1.1
64ze8bd3z1z:1-62Ycf95044 → 5044.1 → 5044.1.1
65Ze8bd3Z1Z:1-62Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors