ECODEvolutionary Classification of Protein Domains

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PDB 8ZEE

16 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APhotosystem II protein D1view chain

1 domain

e8zeeA01(A:10-302)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e8zeeB1(B:1-258)e8zeeB2(B:329-444)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e8zeeC1(C:13-461)

Chain DPhotosystem II D2 proteinview chain

1 domain

e8zeeD1(D:5-352)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e8zeeE1(E:7-82)

Chain FCytochrome b559 subunit betaview chain

1 domain

e8zeeF1(F:14-44)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e8zeeH1(H:19-86)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e8zeeI1(I:1-35)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e8zeeK1(K:10-46)

Chain LPhotosystem II reaction center protein Lview chain

1 domain

e8zeeL1(L:4-38)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e8zeeM1(M:3-32)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e8zeeT1(T:1-30)

Chain VPhotosystem II reaction center protein Psb30view chain

1 domain

e8zeeV1(V:2-33)

Chain X4.1 kDa photosystem II subunitview chain

1 domain

e8zeeX1(X:64-98)

Chain ZPhotosystem II reaction center protein Zview chain

1 domain

e8zeeZ1(Z:1-61)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8zeeA01	A:10-302	Photo_RC	5037 → 5037.1 → 5037.1.1
2	B	e8zeeB1	B:1-258	PSII	5075 → 5075.1 → 5075.1.1
3	B	e8zeeB2	B:329-444	PSII	3744 → 3744.1 → 3744.1.1
4	C	e8zeeC1	C:13-461	PSII	5075 → 5075.1 → 5075.1.1
5	D	e8zeeD1	D:5-352	Photo_RC	5037 → 5037.1 → 5037.1.1
6	E	e8zeeE1	E:7-82	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
7	F	e8zeeF1	F:14-44	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
8	H	e8zeeH1	H:19-86	PsbH	5032 → 5032.1 → 5032.1.1
9	I	e8zeeI1	I:1-35	PsbI	5035 → 5035.1 → 5035.1.1
10	K	e8zeeK1	K:10-46	PsbK	5034 → 5034.1 → 5034.1.1
11	L	e8zeeL1	L:4-38	PsbL	5030 → 5030.1 → 5030.1.1
12	M	e8zeeM1	M:3-32	PsbM	5033 → 5033.1 → 5033.1.1
13	T	e8zeeT1	T:1-30	PsbT	3390 → 3390.1 → 3390.1.1
14	V	e8zeeV1	V:2-33	PSII_Ycf12	3379 → 3379.1 → 3379.1.1
15	X	e8zeeX1	X:64-98	PsbX	3493 → 3493.1 → 3493.1.1
16	Z	e8zeeZ1	Z:1-61	Ycf9	5044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors