ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jkvB1 - ECOD Domain | ECOD

ECOD/Domains/e4jkvB1

e4jkvB1

UID: 001101738

PDB

Range: B:190-552
PDB: 4JKV chain B(all domains)
UniProt: Q99835 (all domains)
Gene: SMO

Molecule: Soluble cytochrome b562, Smoothened homolog

3D Structure

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Related Domains

Browse other domains in Frizzled →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyFrizzled(5001.1.1.7)

Ligands

in contact, ≤ 4 Å

Taladegib1KS
drugDrugBank DB12550
Oleic acidOLA
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Pfam Families

PF01534Frizzled

Frizzled/Smoothened family membrane region

ClanCL0192GPCR_A

External Links

ECOD PDB View: 4JKV RCSB PDB: 4JKV PDBe: 4JKV UniProt: Q99835

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.