ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nogB1 - ECOD Domain | ECOD

ECOD/Domains/e4nogB1

e4nogB1

UID: 001121975

RepresentativePDB

Range: B:17-338
PDB: 4NOG chain B(all domains)
UniProt: S8EY38 (all domains)
Gene: TGME49_269110

Molecule: Putative ornithine aminotransferase, mitochondrial

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4NOG RCSB PDB: 4NOG PDBe: 4NOG UniProt: S8EY38

Downloads

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DI(HYDROXYETHYL)ETHER

Shown in the structure viewer. Drug annotations from DrugDomain.