ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y3uA3 - ECOD Domain | ECOD

ECOD/Domains/e2y3uA3

e2y3uA3

UID: 001147779

RepresentativePDB

Range: A:676-790
PDB: 2Y3U chain A(all domains)
UniProt: Q9X721 (all domains)
Gene: colG

Molecule: COLLAGENASE

3D Structure

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Related Domains

Browse other domains in ColG_sub →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCollagenase G catalytic helper subdomain(304.153)

TT-groupCollagenase G catalytic helper subdomain(304.153.1)

FFamilyColG_sub(304.153.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citrate anion, DI(HYDROXYETHYL)ETHER)

Citrate anionFLC
DI(HYDROXYETHYL)ETHERPEG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18496ColG_sub

Collagenase G catalytic helper subdomain

External Links

ECOD PDB View: 2Y3U RCSB PDB: 2Y3U PDBe: 2Y3U UniProt: Q9X721

Downloads

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