ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gvkB1 - ECOD Domain | ECOD

ECOD/Domains/e3gvkB1

e3gvkB1

UID: 001339001

PDB

Range: B:246-311
PDB: 3GVK chain B(all domains)
UniProt: Q04830 (all domains)

Molecule: Tail spike protein (TSP) (Endo-N-acetylneuraminidase) (Endo-N) (Endo-alpha-sialidase) (EC 3.2.1.129) (EndoNF) (G102) [Cleaved into: Mature tail spike protein; Intramolecular chaperone]

3D Structure

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Related Domains

Browse other domains in End_N_terminal →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyEnd_N_terminal(207.2.1.19)

Pfam Families

PF12218End_N_terminal

N terminal extension of bacteriophage endosialidase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 3GVK RCSB PDB: 3GVK PDBe: 3GVK UniProt: Q04830

Downloads

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