ECODEvolutionary Classification of Protein Domains

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PDB 3GVK

X-RAY DIFFRACTION1.84 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e3gvkA1(A:312-421,A:511-760)e3gvkA2(A:422-510)e3gvkA3(A:267-311)e3gvkA4(A:761-910)

Chain Bview chain

4 domains

e3gvkB2(B:761-910)e3gvkB1(B:246-311)e3gvkB3(B:423-511)e3gvkB4(B:312-422,B:512-760)

Chain Cview chain

4 domains

e3gvkC2(C:761-910)e3gvkC1(C:246-311)e3gvkC3(C:423-511)e3gvkC4(C:312-422,C:512-760)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3gvkA1	A:312-421,A:511-760	End_beta_propel	5 → 5.1 → 5.1.3
2	A	e3gvkA2	A:422-510	End_beta_barrel	1 → 1.1 → 1.1.7
3	A	e3gvkA3	A:267-311	End_N_terminal	207 → 207.2 → 207.2.1
4	A	e3gvkA4	A:761-910	End_tail_spike	79 → 79.1 → 79.1.1
5	B	e3gvkB2	B:761-910	End_tail_spike	79 → 79.1 → 79.1.1
6	B	e3gvkB1	B:246-311	End_N_terminal	207 → 207.2 → 207.2.1
7	B	e3gvkB3	B:423-511	End_beta_barrel	1 → 1.1 → 1.1.7
8	B	e3gvkB4	B:312-422,B:512-760	End_beta_propel	5 → 5.1 → 5.1.3
9	C	e3gvkC2	C:761-910	End_tail_spike	79 → 79.1 → 79.1.1
10	C	e3gvkC1	C:246-311	End_N_terminal	207 → 207.2 → 207.2.1
11	C	e3gvkC3	C:423-511	End_beta_barrel	1 → 1.1 → 1.1.7
12	C	e3gvkC4	C:312-422,C:512-760	End_beta_propel	5 → 5.1 → 5.1.3

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors