ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iydF3 - ECOD Domain | ECOD

ECOD/Domains/e3iydF3

e3iydF3

UID: 001392974

PDB

Range: F:114-173,F:212-446
PDB: 3IYD chain F(all domains)
UniProt: P00579 (all domains)
Gene: rpoD

Molecule: RNA polymerase sigma factor RpoD (Sigma-70)

3D Structure

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Related Domains

Browse other domains in Sigma70_r2,Sigma70_ner →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySigma70_r2,Sigma70_ner(142.1.1.4)

Pfam Families

PF04542Sigma70_r2

Sigma-70 region 2

ClanCL0123HTH

PF04546Sigma70_ner

Sigma-70, non-essential region

ClanCL0123HTH

External Links

ECOD PDB View: 3IYD RCSB PDB: 3IYD PDBe: 3IYD UniProt: P00579

Downloads

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