ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cxmC1 - ECOD Domain | ECOD

ECOD/Domains/e4cxmC1

e4cxmC1

UID: 001397623

PDB

Range: C:41-97
PDB: 4CXM chain C(all domains)
UniProt: Q8II73 (all domains)
Gene: PF3D7_1129000

Molecule: SPERMIDINE SYNTHASE

3D Structure

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Related Domains

Browse other domains in Spermine_synt_N →

Classification

AArchitecturebeta meanders(a.2)

XX-groupSpermidine synthase tetramerisation domain(3699)

HH-groupSpermidine synthase tetramerisation domain(3699.1)

TT-groupSpermidine synthase tetramerisation domain(3699.1.1)

FFamilySpermine_synt_N(3699.1.1.1)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
SpermidineSPD
drugDrugBank DB03566

Shown in the structure viewer.

Pfam Families

PF17284Spermine_synt_N

Spermidine synthase tetramerisation domain

External Links

ECOD PDB View: 4CXM RCSB PDB: 4CXM PDBe: 4CXM UniProt: Q8II73

Downloads

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Drug annotations from DrugDomain.