ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d7qA2 - ECOD Domain | ECOD

ECOD/Domains/e4d7qA2

e4d7qA2

UID: 001488777

PDB

Range: A:198-338
PDB: 4D7Q chain A(all domains)
UniProt: Q8RT31 (all domains)
Gene: ralF

Molecule: RALF, PROLINE/BETAINE TRANSPORTER

3D Structure

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Related Domains

Browse other domains in RalF_SCD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupRalF, C-terminal domain(331.14)

TT-groupRalF, C-terminal domain(331.14.1)

FFamilyRalF_SCD(331.14.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (HEPES, Glycerin, Nitrate, …)

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

PF18248RalF_SCD

RalF C-terminal Sec-7 capping domain

External Links

ECOD PDB View: 4D7Q RCSB PDB: 4D7Q PDBe: 4D7Q UniProt: Q8RT31

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.