ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1poy32 - ECOD Domain | ECOD

ECOD/Domains/e1poy32

e1poy32

UID: 001522157

PDB

Range: 3:132-255
PDB: 1POY chain 3(all domains)
UniProt: P0AFK9 (all domains)
Gene: potD

Molecule: SPERMIDINE/PUTRESCINE-BINDING PROTEIN

3D Structure

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Related Domains

Browse other domains in SBP_bac_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_6(7523.1.1.26)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13343SBP_bac_6

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 1POY RCSB PDB: 1POY PDBe: 1POY UniProt: P0AFK9

Downloads

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