ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3q5eE2 - ECOD Domain | ECOD

ECOD/Domains/e3q5eE2

e3q5eE2

UID: 001611569

PDB

Range: E:30-344
PDB: 3Q5E chain E(all domains)
UniProt: Q8WXF7 (all domains)
Gene: ATL1

Molecule: Atlastin-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in GBP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGBP(2004.1.1.81)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Guanylate-binding protein, N-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3Q5E RCSB PDB: 3Q5E PDBe: 3Q5E UniProt: Q8WXF7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure