ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rcnA1 - ECOD Domain | ECOD

ECOD/Domains/e2rcnA1

e2rcnA1

UID: 000166830

PDB

Range: A:111-345
PDB: 2RCN chain A(all domains)
UniProt: Q8ZKB0 (all domains)
Gene: rsgA

Molecule: Probable GTPase engC

3D Structure

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Related Domains

Browse other domains in MMR_HSR1, RsgA_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1, RsgA_GTPase(2004.1.1.422)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

PF03193RsgA_GTPase

RsgA GTPase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2RCN RCSB PDB: 2RCN PDBe: 2RCN UniProt: Q8ZKB0

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.