ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c6sA1 - ECOD Domain | ECOD

ECOD/Domains/e5c6sA1

e5c6sA1

UID: 001683716

PDB

Range: A:1079-1204
PDB: 5C6S chain A(all domains)
UniProt: P55201 (all domains)
Gene: BRPF1

Molecule: Peregrin

3D Structure

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Related Domains

Browse other domains in PWWP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyPWWP(4.1.1.12)

Ligands

in contact, ≤ 4 Å

isoquinoline-3-carboxylic acid4K8
Chloride ionCL
Unknown atom or ionUNX

Pfam Families

PWWP domain

ClanCL0010SH3

External Links

ECOD PDB View: 5C6S RCSB PDB: 5C6S PDBe: 5C6S UniProt: P55201

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.