ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cjvB1 - ECOD Domain | ECOD

ECOD/Domains/e5cjvB1

e5cjvB1

UID: 001684495

PDB

Range: B:166-440
PDB: 5CJV chain B(all domains)
UniProt: Q1LRY0 (all domains)
Gene: icmF

Molecule: Isobutyryl-CoA mutase fused

3D Structure

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Related Domains

Browse other domains in MeaB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMeaB(2004.1.1.101)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Methylmalonyl Co-A mutase-associated GTPase MeaB

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5CJV RCSB PDB: 5CJV PDBe: 5CJV UniProt: Q1LRY0

Downloads

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