ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ddfA2 - ECOD Domain | ECOD

ECOD/Domains/e5ddfA2

e5ddfA2

UID: 001684607

PDB

Range: A:2-230
PDB: 5DDF chain A(all domains)
UniProt: O00255 (all domains)
Gene: MEN1

Molecule: Menin

3D Structure

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Related Domains

Browse other domains in Menin →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyMenin(219.1.1.27)

Ligands

in contact, ≤ 4 Å

4-[4-(5,5-dimethyl-4,5-dihydro-1,3-thiazol-2-yl)piperazin-1-yl]-6-(pentafluoroethyl)thieno[2,3-d]pyrimidine5A1

+ 3 additives (Dimethyl sulfoxide, Sulfate ion, DI(HYDROXYETHYL)ETHER)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ion

Pfam Families

Menin

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5DDF RCSB PDB: 5DDF PDBe: 5DDF UniProt: O00255

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.