ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d8bVB1 - ECOD Domain | ECOD

ECOD/Domains/e5d8bVB1

e5d8bVB1

UID: 001694810

PDB

Range: VB:9-52
PDB: 5D8B chain VB(all domains)
UniProt: P35871 (all domains)
Gene: rpmG

Molecule: Large ribosomal subunit protein bL33 (50S ribosomal protein L33)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L33 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L33(375.1.1.3)

Pfam Families

PF00471Ribosomal_L33

Ribosomal protein L33

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5D8B RCSB PDB: 5D8B PDBe: 5D8B UniProt: P35871

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure