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PDB 5D8B

X-RAY DIFFRACTION3.63 Å0 chains112 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (112)

#ChainDomain IDRangeFamilyClassification
1Ae5d8bA1A:127-272Ribosomal_L2_C4 → 4.1 → 4.1.1
2Ae5d8bA2A:2-126Ribosomal_L22 → 2.1 → 2.1.1
3AAe5d8bAA1AA:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
4ABe5d8bAB1AB:83-175Ribosomal_L6318 → 318.1 → 318.1.1
5ABe5d8bAB2AB:2-82Ribosomal_L6318 → 318.1 → 318.1.1
6ACe5d8bAC1AC:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
7Be5d8bB1B:1-204Ribosomal_L31 → 1.1 → 1.1.7
8BAe5d8bBA1BA:2-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
9BBe5d8bBB1BB:54-145Ribosomal_L9_C523 → 523.1 → 523.1.1
10BBe5d8bBB2BB:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
11BCe5d8bBC1BC:5-73Ribosomal_S5330 → 330.1 → 330.1.1
12BCe5d8bBC2BC:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
13Ce5d8bC1C:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
14CAe5d8bCA1CA:7-240Ribosomal_S22007 → 2007.6 → 2007.6.1
15CBe5d8bCB1CB:1-69Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
16CBe5d8bCB2CB:70-147Ribosomal_L11101 → 101.1 → 101.1.16
17CCe5d8bCC1CC:1-101Ribosomal_S6304 → 304.12 → 304.12.1
18De5d8bD1D:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
19DAe5d8bDA1DA:2-106KH_2327 → 327.11 → 327.11.1
20DAe5d8bDA2DA:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
21DBe5d8bDB1DB:25-161Ribosomal_L132490 → 2490.2 → 2490.2.1
22DCe5d8bDC1DC:2-156Ribosomal_S7167 → 167.1 → 167.1.1
23Ee5d8bE1E:2-82Ribosomal_L6318 → 318.1 → 318.1.1
24Ee5d8bE2E:83-175Ribosomal_L6318 → 318.1 → 318.1.1
25EAe5d8bEA1EA:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
26EBe5d8bEB1EB:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
27ECe5d8bEC1EC:1-66Ribosomal_S8320 → 320.2 → 320.2.1
28ECe5d8bEC2EC:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
29Fe5d8bF1F:54-145Ribosomal_L9_C523 → 523.1 → 523.1.1
30Fe5d8bF2F:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
31FAe5d8bFA1FA:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
32FAe5d8bFA2FA:5-73Ribosomal_S5330 → 330.1 → 330.1.1
33FBe5d8bFB1FB:5-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
34FCe5d8bFC1FC:2-128Ribosomal_S9212 → 212.1 → 212.1.1
35Ge5d8bG1G:72-147Ribosomal_L11101 → 101.1 → 101.1.16
36Ge5d8bG2G:1-71Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
37GAe5d8bGA1GA:1-101Ribosomal_S6304 → 304.12 → 304.12.1
38GBe5d8bGB1GB:6-139325.1.5.0325 → 325.1 → 325.1.5
39GCe5d8bGC1GC:3-100Ribosomal_S10304 → 304.44 → 304.44.1
40He5d8bH1H:25-161Ribosomal_L132490 → 2490.2 → 2490.2.1
41HAe5d8bHA1HA:2-156Ribosomal_S7167 → 167.1 → 167.1.1
42HBe5d8bHB1HB:2-118Ribosomal_L17218 → 218.3 → 218.3.1
43HCe5d8bHC1HC:11-124Ribosomal_S112484 → 2484.1 → 2484.1.1
44Ie5d8bI1I:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
45IAe5d8bIA1IA:1-66Ribosomal_S8320 → 320.2 → 320.2.1
46IAe5d8bIA2IA:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
47IBe5d8bIB1IB:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
48ICe5d8bIC1IC:4-125Ribosom_S12_S232 → 2.1 → 2.1.1
49Je5d8bJ1J:5-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
50JAe5d8bJA1JA:2-128Ribosomal_S9212 → 212.1 → 212.1.1
51JBe5d8bJB1JB:1-137Ribosomal_L194 → 4.1 → 4.1.1
52JCe5d8bJC1JC:2-118Ribosomal_S13102 → 102.2 → 102.2.1
53Ke5d8bK1K:6-139325.1.5.0325 → 325.1 → 325.1.5
54KAe5d8bKA1KA:3-100Ribosomal_S10304 → 304.44 → 304.44.1
55KBe5d8bKB1KB:2-118Ribosomal_L20143 → 143.2 → 143.2.1
56KCe5d8bKC1KC:2-61Ribosomal_S14377 → 377.1 → 377.1.1
57Le5d8bL1L:2-118Ribosomal_L17218 → 218.3 → 218.3.1
58LAe5d8bLA1LA:11-124Ribosomal_S112484 → 2484.1 → 2484.1.1
59LBe5d8bLB1LB:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
60LCe5d8bLC1LC:2-89Ribosomal_S15616 → 616.1 → 616.1.1
61Me5d8bM1M:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
62MAe5d8bMA1MA:4-125Ribosom_S12_S232 → 2.1 → 2.1.1
63MBe5d8bMB1MB:1-112Ribosomal_L22218 → 218.2 → 218.2.1
64MCe5d8bMC1MC:1-83Ribosomal_S16837 → 837.1 → 837.1.1
65Ne5d8bN1N:1-137Ribosomal_L194 → 4.1 → 4.1.1
66NAe5d8bNA1NA:2-118Ribosomal_S13102 → 102.2 → 102.2.1
67NBe5d8bNB1NB:3-94Ribosomal_L23304 → 304.109 → 304.109.1
68NCe5d8bNC1NC:2-100Ribosomal_S172 → 2.1 → 2.1.1
69Oe5d8bO1O:2-118Ribosomal_L20143 → 143.2 → 143.2.1
70OAe5d8bOA1OA:2-61Ribosomal_S14377 → 377.1 → 377.1.1
71OBe5d8bOB1OB:2-101KOW,ribosomal_L244 → 4.1 → 4.1.1
72OCe5d8bOC1OC:19-88Ribosomal_S18101 → 101.1 → 101.1.1
73Pe5d8bP1P:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
74PAe5d8bPA1PA:2-89Ribosomal_S15616 → 616.1 → 616.1.1
75PBe5d8bPB1PB:3-92Ribosomal_L25p239 → 239.1 → 239.1.1
76PBe5d8bPB2PB:93-189Ribosomal_TL5_C240 → 240.1 → 240.1.1
77PCe5d8bPC1PC:4-81Ribosomal_S19838 → 838.1 → 838.1.1
78Qe5d8bQ1Q:1-112Ribosomal_L22218 → 218.2 → 218.2.1
79QAe5d8bQA1QA:1-83Ribosomal_S16837 → 837.1 → 837.1.1
80QBe5d8bQB1QB:10-85Ribosomal_L27325 → 325.1 → 325.1.8
81QCe5d8bQC1QC:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
82Re5d8bR1R:3-94Ribosomal_L23304 → 304.109 → 304.109.1
83RAe5d8bRA1RA:2-100Ribosomal_S172 → 2.1 → 2.1.1
84RBe5d8bRB1RB:8-95Ribosomal_L284232 → 4232.1 → 4232.1.1
85Se5d8bS1S:2-101KOW,ribosomal_L244 → 4.1 → 4.1.1
86SAe5d8bSA1SA:19-88Ribosomal_S18101 → 101.1 → 101.1.1
87SBe5d8bSB1SB:1-62Ribosomal_L29192 → 192.4 → 192.4.1
88SCe5d8bSC1SC:36-65Ribosomal_L314987 → 4987.1 → 4987.1.1
89Te5d8bT1T:94-189Ribosomal_TL5_C240 → 240.1 → 240.1.1
90Te5d8bT2T:3-93Ribosomal_L25p239 → 239.1 → 239.1.1
91TAe5d8bTA1TA:4-81Ribosomal_S19838 → 838.1 → 838.1.1
92TBe5d8bTB1TB:1-59Ribosomal_L30887 → 887.1 → 887.1.1
93TCe5d8bTC1TC:36-65Ribosomal_L314987 → 4987.1 → 4987.1.1
94Ue5d8bU1U:10-85Ribosomal_L27325 → 325.1 → 325.1.8
95UAe5d8bUA1UA:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
96UBe5d8bUB1UB:2-53Ribosomal_L32p375 → 375.1 → 375.1.1
97Ve5d8bV1V:8-95Ribosomal_L284232 → 4232.1 → 4232.1.1
98VBe5d8bVB1VB:9-52Ribosomal_L33375 → 375.1 → 375.1.1
99We5d8bW1W:1-62Ribosomal_L29192 → 192.4 → 192.4.1
100WAe5d8bWA1WA:2-126Ribosomal_L22 → 2.1 → 2.1.1
101WAe5d8bWA2WA:127-272Ribosomal_L2_C4 → 4.1 → 4.1.1
102WBe5d8bWB1WB:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
103Xe5d8bX1X:1-59Ribosomal_L30887 → 887.1 → 887.1.1
104XAe5d8bXA1XA:1-204Ribosomal_L31 → 1.1 → 1.1.7
105XBe5d8bXB1XB:2-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
106Ye5d8bY1Y:2-53Ribosomal_L32p375 → 375.1 → 375.1.1
107YAe5d8bYA1YA:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
108YBe5d8bYB1YB:7-240Ribosomal_S22007 → 2007.6 → 2007.6.1
109Ze5d8bZ1Z:9-52Ribosomal_L33375 → 375.1 → 375.1.1
110ZAe5d8bZA1ZA:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
111ZBe5d8bZB1ZB:2-106KH_2327 → 327.11 → 327.11.1
112ZBe5d8bZB2ZB:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors