ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f2vR1 - ECOD Domain | ECOD

ECOD/Domains/e5f2vR1

e5f2vR1

UID: 001719470

PDB

Range: R:3-197
PDB: 5F2V chain R(all domains)
UniProt: O31611 (all domains)
Gene: yjbM

Molecule: GTP pyrophosphokinase YjbM (EC 2.7.6.5) ((p)ppGpp synthase YjbM) (Small alarmone synthase 1) (SAS 1)

3D Structure

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Related Domains

Browse other domains in RelA_SpoT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyRelA_SpoT(316.1.1.13)

Pfam Families

PF04607RelA_SpoT

Region found in RelA / SpoT proteins

ClanCL0260NTP_transf

External Links

ECOD PDB View: 5F2V RCSB PDB: 5F2V PDBe: 5F2V UniProt: O31611

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