ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yu0A1 - ECOD Domain | ECOD

ECOD/Domains/e4yu0A1

e4yu0A1

UID: 001723528

PDB

Range: A:4-108,A:219-262
PDB: 4YU0 chain A(all domains)
UniProt: P19491 (all domains)
Gene: Gria2

Molecule: Glutamate receptor 2,Glutamate receptor 2

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142

+ 2 additives (Phosphate ion, DI(HYDROXYETHYL)ETHER)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 4YU0 RCSB PDB: 4YU0 PDBe: 4YU0 UniProt: P19491

Downloads

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DI(HYDROXYETHYL)ETHER

Shown in the structure viewer. Drug annotations from DrugDomain.