ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5do9C1 - ECOD Domain | ECOD

ECOD/Domains/e5do9C1

e5do9C1

UID: 001726101

PDB

Range: C:37-66,C:187-350
PDB: 5DO9 chain C(all domains)
UniProt: P21279 (all domains)
Gene: Gnaq

Molecule: Guanine nucleotide-binding protein G(q) subunit alpha

3D Structure

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Related Domains

Browse other domains in G-alpha →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyG-alpha(2004.1.1.47)

Ligands

in contact, ≤ 4 Å

Tetrafluoroaluminate IonALF
drugDrugBank DB04444
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Pfam Families

PF00503G-alpha

G-protein alpha subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5DO9 RCSB PDB: 5DO9 PDBe: 5DO9 UniProt: P21279

Downloads

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Magnesium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.