ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jb9A2 - ECOD Domain | ECOD

ECOD/Domains/e3jb9A2

e3jb9A2

UID: 001735838

PDB

Range: A:835-1207
PDB: 3JB9 chain A(all domains)
UniProt: O14187 (all domains)
Gene: spp42

Molecule: Pre-mRNA-splicing factor spp42 (Complexed with cdc5 protein 6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRM_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRRM_4(304.48.1.25)

Pfam Families

RNA recognition motif of the spliceosomal PrP8

External Links

ECOD PDB View: 3JB9 RCSB PDB: 3JB9 PDBe: 3JB9 UniProt: O14187

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure