PDB 3JB9
ELECTRON MICROSCOPY0 chains49 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
2 domainsChain Aview chain
5 domainsChain bview chain
1 domainChain Bview chain
5 domainsChain cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain nview chain
1 domainChain oview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Uview chain
2 domainsChain Vview chain
1 domainChain Wview chain
2 domainsChain Yview chain
2 domainsChain Zview chain
1 domainAll Domains (49)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e3jb9a1 | a:170-184,a:224-284 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 2 | a | e3jb9a2 | a:18-87 | STL11_N | 376 → 376.1 → 376.1.3 |
| 3 | A | e3jb9A1 | A:47-834 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 4 | A | e3jb9A2 | A:835-1207 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 5 | A | e3jb9A3 | A:1208-1526 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 6 | A | e3jb9A4 | A:1527-1780 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 7 | A | e3jb9A5 | A:1781-2030 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 8 | b | e3jb9b1 | b:2-87 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | B | e3jb9B1 | B:452-594 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 10 | B | e3jb9B2 | B:595-673 | EFG_III | 304 → 304.24 → 304.24.1 |
| 11 | B | e3jb9B3 | B:140-451 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 12 | B | e3jb9B4 | B:674-842 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 13 | B | e3jb9B5 | B:843-971 | EFG_C | 304 → 304.24 → 304.24.1 |
| 14 | c | e3jb9c1 | c:408-633 | CwfJ_C_2,CwfJ_C_1 | 312 → 312.1 → 312.1.1 |
| 15 | d | e3jb9d1 | d:1-155 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 16 | D | e3jb9D1 | D:2-97 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | e | e3jb9e1 | e:3-146 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 18 | E | e3jb9E1 | E:2-87 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | f | e3jb9f1 | f:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | F | e3jb9F1 | F:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | g | e3jb9g01 | g:51-558 | WD40 | 5 → 5.1 → 5.1.1 |
| 22 | G | e3jb9G1 | G:19-115 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | H | e3jb9H1 | H:9-84 | LSM | 4 → 4.1 → 4.1.1 |
| 24 | I | e3jb9I1 | I:4-78 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | j | e3jb9j1 | j:1-162 | LRR_4, LRR_9 | 207 → 207.1 → 207.1.1 |
| 26 | J | e3jb9J1 | J:3-75 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | k | e3jb9k1 | k:5-93 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 28 | K | e3jb9K1 | K:154-470 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.5 |
| 29 | l | e3jb9l1 | l:19-115 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | L | e3jb9L1 | L:42-340 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 31 | m | e3jb9m1 | m:9-84 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | n | e3jb9n1 | n:4-78 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | o | e3jb9o1 | o:3-75 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | r | e3jb9r1 | r:477-737 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 35 | R | e3jb9R1 | R:13-327 | HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 36 | S | e3jb9S1 | S:1-51 | U-box | 376 → 376.1 → 376.1.1 |
| 37 | T | e3jb9T1 | T:1-51 | U-box | 376 → 376.1 → 376.1.1 |
| 38 | U | e3jb9U1 | U:1-51 | U-box | 376 → 376.1 → 376.1.1 |
| 39 | U | e3jb9U2 | U:173-488 | WD40, ANAPC4_WD40 | 5 → 5.1 → 5.1.5 |
| 40 | V | e3jb9V1 | V:1-51 | U-box | 376 → 376.1 → 376.1.1 |
| 41 | W | e3jb9W1 | W:8-62 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 42 | W | e3jb9W2 | W:58-109,W:154-178 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 43 | X | e3jb9X1 | X:668-1044 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 44 | X | e3jb9X2 | X:1045-1284 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 45 | X | e3jb9X3 | X:7-383 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 46 | X | e3jb9X4 | X:464-614 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 47 | Y | e3jb9Y1 | Y:49-167 | Torus | 906 → 906.1 → 906.1.1 |
| 48 | Y | e3jb9Y2 | Y:168-235 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 49 | Z | e3jb9Z1 | Z:2-81 | LSM | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors