ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jb9A3 - ECOD Domain | ECOD

ECOD/Domains/e3jb9A3

e3jb9A3

UID: 001735839

PDB

Range: A:1208-1526
PDB: 3JB9 chain A(all domains)
UniProt: O14187 (all domains)
Gene: spp42

Molecule: Pre-mRNA-splicing factor spp42 (Complexed with cdc5 protein 6)

3D Structure

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Related Domains

Browse other domains in U6-snRNA_bdg,U5_2-snRNA_bdg →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyU6-snRNA_bdg,U5_2-snRNA_bdg(4967.1.1.12)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

PF10597U5_2-snRNA_bdg

U5-snRNA binding site 2 of PrP8

External Links

ECOD PDB View: 3JB9 RCSB PDB: 3JB9 PDBe: 3JB9 UniProt: O14187

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