ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jb9U1 - ECOD Domain | ECOD

ECOD/Domains/e3jb9U1

e3jb9U1

UID: 001756815

PDB

Range: U:1-51
PDB: 3JB9 chain U(all domains)
UniProt: O14011 (all domains)
Gene: prp19

Molecule: Pre-mRNA-processing factor 19 (EC 2.3.2.27) (Complexed with cdc5 protein 8) (RING-type E3 ubiquitin transferase PRP19)

3D Structure

Loading viewer...

Related Domains

Browse other domains in U-box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyU-box(376.1.1.8)

Pfam Families

U-box domain

ClanCL0229RING

External Links

ECOD PDB View: 3JB9 RCSB PDB: 3JB9 PDBe: 3JB9 UniProt: O14011

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure