ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4fmuA1 - ECOD Domain | ECOD

ECOD/Domains/e4fmuA1

e4fmuA1

UID: 001830871

PDB

Range: A:1444-1507,A:1548-1689
PDB: 4FMU chain A(all domains)
UniProt: Q9BYW2 (all domains)
Gene: SETD2

Molecule: Histone-lysine N-methyltransferase SETD2

3D Structure

Loading viewer...

Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

(2S,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-(propylamino)hexanoic acid0UM
Unknown atom or ionUNX
Zinc ionZN

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 4FMU RCSB PDB: 4FMU PDBe: 4FMU UniProt: Q9BYW2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.