ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iy9D1 - ECOD Domain | ECOD

ECOD/Domains/e5iy9D1

e5iy9D1

UID: 001831737

PDB

Range: D:14-142
PDB: 5IY9 chain D(all domains)
UniProt: O15514 (all domains)
Gene: POLR2D

Molecule: DNA-directed RNA polymerase II subunit RPB4 (RNA polymerase II subunit B4) (DNA-directed RNA polymerase II subunit D) (RNA polymerase II 16 kDa subunit) (RPB16)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyRNA_pol_Rpb4(102.1.1.11)

Pfam Families

PF03874RNA_pol_Rpb4

RNA polymerase Rpb4

ClanCL0426HRDC-like

External Links

ECOD PDB View: 5IY9 RCSB PDB: 5IY9 PDBe: 5IY9 UniProt: O15514

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