ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jknA1 - ECOD Domain | ECOD

ECOD/Domains/e5jknA1

e5jknA1

UID: 001851185

RepresentativePDB

Range: A:111-369
PDB: 5JKN chain A(all domains)
UniProt: Q8N5J2 (all domains)
Gene: MINDY1

Molecule: Ubiquitin carboxyl-terminal hydrolase MINDY-1 (EC 3.4.19.12) (Deubiquitinating enzyme MINDY-1) (Protein FAM63A)

3D Structure

Loading viewer...

Related Domains

Browse other domains in MINDY_DUB →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyMINDY_DUB(219.1.1.23)

Pfam Families

PF04424MINDY_DUB

MINDY deubiquitinase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5JKN RCSB PDB: 5JKN PDBe: 5JKN UniProt: Q8N5J2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure