ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j88CK1 - ECOD Domain | ECOD

ECOD/Domains/e5j88CK1

e5j88CK1

UID: 001859925

PDB

Range: CK:1-142
PDB: 5J88 chain CK(all domains)
UniProt: P0AA10 (all domains)
Gene: rplM

Molecule: Large ribosomal subunit protein uL13 (50S ribosomal protein L13)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L13/L15p/L18e/L32e(2490)

HH-groupRibosomal protein L13 and L16-A(2490.2)

TT-groupRibosomal protein L13 and L16-A(2490.2.1)

FFamilyRibosomal_L13(2490.2.1.1)

Pfam Families

PF00572Ribosomal_L13

Ribosomal protein L13

External Links

ECOD PDB View: 5J88 RCSB PDB: 5J88 PDBe: 5J88 UniProt: P0AA10

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure