ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kcoA3 - ECOD Domain | ECOD

ECOD/Domains/e5kcoA3

e5kcoA3

UID: 001868765

PDB

Range: A:196-250
PDB: 5KCO chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

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Related Domains

Browse other domains in DUF5604 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyDUF5604(4.1.1.105)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18300DUF5604

Domain of unknown function (DUF5604)

ClanCL0010SH3

External Links

ECOD PDB View: 5KCO RCSB PDB: 5KCO PDBe: 5KCO UniProt: Q15047

Downloads

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