ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kh3A1 - ECOD Domain | ECOD

ECOD/Domains/e5kh3A1

e5kh3A1

UID: 001868776

PDB

Range: A:1108-1208
PDB: 5KH3 chain A(all domains)
UniProt: Q9UBN7 (all domains)
Gene: HDAC6

Molecule: Protein deacetylase HDAC6 (EC 3.5.1.-) (E3 ubiquitin-protein ligase HDAC6) (EC 2.3.2.-) (Tubulin-lysine deacetylase HDAC6) (EC 3.5.1.-)

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 5KH3 RCSB PDB: 5KH3 PDBe: 5KH3 UniProt: Q9UBN7

Downloads

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