ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5gmky1 - ECOD Domain | ECOD

ECOD/Domains/e5gmky1

e5gmky1

UID: 001872139

PDB

Range: y:4-85
PDB: 5GMK chain y(all domains)
UniProt: P43321 (all domains)
Gene: SMD3

Molecule: Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LSM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM(4.1.1.19)

Pfam Families

LSM domain

ClanCL0986Sm-like

External Links

ECOD PDB View: 5GMK RCSB PDB: 5GMK PDBe: 5GMK UniProt: P43321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure