ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5lj3O1 - ECOD Domain | ECOD

ECOD/Domains/e5lj3O1

e5lj3O1

UID: 001877691

PDB

Range: O:12-58
PDB: 5LJ3 chain O(all domains)
UniProt: Q03654 (all domains)
Gene: CEF1

Molecule: Pre-mRNA-splicing factor CEF1 (PRP nineteen-associated complex protein 85) (PRP19-associated complex protein 85)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Myb_DNA-binding →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyMyb_DNA-binding(101.1.1.3)

Pfam Families

PF00249Myb_DNA-binding

Myb-like DNA-binding domain

ClanCL0123HTH

External Links

ECOD PDB View: 5LJ3 RCSB PDB: 5LJ3 PDBe: 5LJ3 UniProt: Q03654

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure