PDB 5LJ3
ELECTRON MICROSCOPY0 chains39 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
5 domainsChain bview chain
1 domainChain Cview chain
5 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
2 domainsChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
2 domainsChain nview chain
1 domainChain Nview chain
2 domainsChain Oview chain
1 domainChain pview chain
1 domainChain qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Wview chain
1 domainChain Yview chain
1 domainAll Domains (39)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5lj3A1 | A:128-428,A:456-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 2 | A | e5lj3A2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 3 | A | e5lj3A3 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 4 | A | e5lj3A4 | A:1831-2085 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 5 | A | e5lj3A5 | A:1575-1827 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 6 | b | e5lj3b1 | b:4-55,b:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 7 | C | e5lj3C1 | C:118-442 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 8 | C | e5lj3C2 | C:708-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 9 | C | e5lj3C3 | C:594-693 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 10 | C | e5lj3C4 | C:856-976 | EFG_C | 304 → 304.24 → 304.24.1 |
| 11 | C | e5lj3C5 | C:443-508,C:529-593 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 12 | d | e5lj3d1 | d:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | e | e5lj3e1 | e:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | f | e5lj3f1 | f:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | g | e5lj3g1 | g:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | G | e5lj3G1 | G:33-97 | Isy1 | 192 → 192.13 → 192.13.1 |
| 17 | h | e5lj3h1 | h:1-48,h:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | H | e5lj3H1 | H:11-207 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 19 | H | e5lj3H2 | H:289-451 | MA3 | 109 → 109.4 → 109.4.1 |
| 20 | j | e5lj3j1 | j:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | J | e5lj3J1 | J:111-445 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 22 | k | e5lj3k1 | k:4-55,k:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | l | e5lj3l1 | l:1-48,l:76-106 | LSM | 4 → 4.1 → 4.1.1 |
| 24 | L | e5lj3L1 | L:2-156 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 25 | m | e5lj3m1 | m:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | M | e5lj3M1 | M:3-122 | Torus | 906 → 906.1 → 906.1.1 |
| 27 | M | e5lj3M2 | M:123-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 28 | n | e5lj3n1 | n:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | N | e5lj3N1 | N:204-266,N:289-296,N:306-324 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 30 | N | e5lj3N2 | N:6-143 | STL11_N | 376 → 376.1 → 376.1.3 |
| 31 | O | e5lj3O1 | O:12-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 32 | p | e5lj3p1 | p:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | q | e5lj3q1 | q:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | r | e5lj3r1 | r:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | R | e5lj3R1 | R:60-111 | cwf21 | 6026 → 6026.1 → 6026.1.1 |
| 36 | S | e5lj3S1 | S:37-556 | HAT, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 37 | T | e5lj3T1 | T:21-163,T:196-349,T:375-790 | HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 38 | W | e5lj3W1 | W:1-167 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 39 | Y | e5lj3Y1 | Y:28-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors