ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dbnC1 - ECOD Domain | ECOD

ECOD/Domains/e5dbnC1

e5dbnC1

UID: 001883428

PDB

Range: C:2-216
PDB: 5DBN chain C(all domains)
UniProt: P76458 (all domains)
Gene: atoD

Molecule: Acetate CoA-transferase subunit alpha

3D Structure

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Related Domains

Browse other domains in CoA_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyCoA_trans(2003.1.7.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, DI(HYDROXYETHYL)ETHER)

Phosphate ionPO4
DrugBank DB14523
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01144CoA_trans

Coenzyme A transferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5DBN RCSB PDB: 5DBN PDBe: 5DBN UniProt: P76458

Downloads

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