ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jczD1 - ECOD Domain | ECOD

ECOD/Domains/e5jczD1

e5jczD1

UID: 001887881

PDB

Range: D:5-177
PDB: 5JCZ chain D(all domains)
UniProt: P62491 (all domains)
Gene: RAB11A

Molecule: Ras-related protein Rab-11A

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Beryllium trifluoride ionBEF
Magnesium ionMG

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5JCZ RCSB PDB: 5JCZ PDBe: 5JCZ UniProt: P62491

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.