ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5lqwA6 - ECOD Domain | ECOD

ECOD/Domains/e5lqwA6

e5lqwA6

UID: 001910348

PDB

Range: A:1596-1827
PDB: 5LQW chain A(all domains)
UniProt: P33334 (all domains)
Gene: PRP8

Molecule: Pre-mRNA-splicing factor 8

3D Structure

Loading viewer...

Related Domains

Browse other domains in U6-snRNA_bdg →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyU6-snRNA_bdg(2008.1.1.52)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

External Links

ECOD PDB View: 5LQW RCSB PDB: 5LQW PDBe: 5LQW UniProt: P33334

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure