PDB 5LQW
ELECTRON MICROSCOPY0 chains59 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
5 domainsChain Cview chain
14 domainsChain dview chain
1 domainChain Dview chain
2 domainsChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain Fview chain
2 domainsChain gview chain
1 domainChain hview chain
1 domainChain Hview chain
2 domainsChain jview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Nview chain
1 domainChain Oview chain
4 domainsChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Wview chain
2 domainsChain Xview chain
4 domainsChain Yview chain
3 domainsChain Zview chain
1 domainAll Domains (59)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5lqwA1 | A:131-428,A:464-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 2 | A | e5lqwA2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 3 | A | e5lqwA3 | A:1256-1409,A:1434-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 4 | A | e5lqwA4 | A:2153-2396 | PROCT | 2492 → 2492.1 → 2492.1.1 |
| 5 | A | e5lqwA5 | A:1831-2078,A:2148-2150 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e5lqwA6 | A:1596-1827 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 7 | b | e5lqwb1 | b:10-55,b:75-101 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | B | e5lqwB1 | B:118-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 9 | B | e5lqwB2 | B:708-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 10 | B | e5lqwB3 | B:595-674 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 11 | B | e5lqwB4 | B:861-976 | EFG_C | 304 → 304.24 → 304.24.1 |
| 12 | B | e5lqwB5 | B:444-508,B:529-580 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 13 | C | e5lqwC1 | C:1317-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 14 | C | e5lqwC2 | C:495-699 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 15 | C | e5lqwC3 | C:701-907 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 16 | C | e5lqwC4 | C:1542-1741 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 17 | C | e5lqwC5 | C:1010-1141 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 18 | C | e5lqwC6 | C:1858-1989 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 19 | C | e5lqwC7 | C:1200-1316 | Sec63 | 11 → 11.1 → 11.1.1 |
| 20 | C | e5lqwC8 | C:2049-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 21 | C | e5lqwC9 | C:908-1009 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 22 | C | e5lqwC10 | C:1742-1821,C:1844-1857 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 23 | C | e5lqwC11 | C:115-191 | BRR2_plug | 592 → 592.6 → 592.6.1 |
| 24 | C | e5lqwC12 | C:1142-1199 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 25 | C | e5lqwC13 | C:1990-2048 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 26 | C | e5lqwC14 | C:420-474 | 1029.1.1.0 | 1029 → 1029.1 → 1029.1.1 |
| 27 | d | e5lqwd1 | d:5-76 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | D | e5lqwD1 | D:171-177,D:215-266 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 29 | D | e5lqwD2 | D:8-143 | STL11_N | 376 → 376.1 → 376.1.3 |
| 30 | e | e5lqwe1 | e:39-91 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | E | e5lqwE1 | E:17-154 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 32 | f | e5lqwf1 | f:19-83 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | F | e5lqwF1 | F:131-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 34 | F | e5lqwF2 | F:8-121 | Torus | 906 → 906.1 → 906.1.1 |
| 35 | g | e5lqwg1 | g:7-74 | LSM | 4 → 4.1 → 4.1.1 |
| 36 | h | e5lqwh1 | h:2-48,h:76-108 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | H | e5lqwH1 | H:11-247 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 38 | H | e5lqwH2 | H:279-485 | MA3 | 109 → 109.4 → 109.4.1 |
| 39 | j | e5lqwj1 | j:29-108 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | J | e5lqwJ1 | J:33-107 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 41 | K | e5lqwK1 | K:135-446 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 42 | N | e5lqwN1 | N:28-204 | FHA | 73 → 73.1 → 73.1.1 |
| 43 | O | e5lqwO1 | O:756-864 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 44 | O | e5lqwO2 | O:610-755 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 45 | O | e5lqwO3 | O:402-574 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 46 | O | e5lqwO4 | O:210-401,O:575-609 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 47 | P | e5lqwP1 | P:396-516,P:536-653 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 48 | Q | e5lqwQ1 | Q:155-960 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 49 | R | e5lqwR1 | R:47-272 | HAT, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 50 | W | e5lqwW1 | W:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 51 | W | e5lqwW2 | W:62-109,W:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 52 | X | e5lqwX1 | X:56-299,X:324-451,X:472-483 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 53 | X | e5lqwX2 | X:852-890,X:925-1231 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 54 | X | e5lqwX3 | X:1232-1252,X:1298-1331 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 55 | X | e5lqwX4 | X:452-784,X:815-851 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 56 | Y | e5lqwY1 | Y:56-70,Y:21-27 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 57 | Y | e5lqwY2 | Y:28-43,Y:71-83 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 58 | Y | e5lqwY3 | Y:82-95,Y:6-18,Y:42-53 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 59 | Z | e5lqwZ1 | Z:5-73 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors