ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gmkd1 - ECOD Domain | ECOD

ECOD/Domains/e5gmkd1

e5gmkd1

UID: 001914503

PDB

Range: d:36-275
PDB: 5GMK chain d(all domains)
UniProt: Q12309 (all domains)
Gene: CLF1

Molecule: Pre-mRNA-splicing factor CLF1 (Crooked neck-like factor 1) (PRP19-associated complex protein 77) (Synthetic lethal with CDC40 protein 3)

3D Structure

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Related Domains

Browse other domains in HAT, HAT_Syf1_CNRKL1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT, HAT_Syf1_CNRKL1_N(109.4.1.1466)

Pfam Families

HAT (Half-A-TPR) repeat

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5GMK RCSB PDB: 5GMK PDBe: 5GMK UniProt: Q12309

Downloads

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