ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gmkv1 - ECOD Domain | ECOD

ECOD/Domains/e5gmkv1

e5gmkv1

UID: 001914504

PDB

Range: v:569-734
PDB: 5GMK chain v(all domains)
UniProt: Q04048 (all domains)
Gene: SYF1

Molecule: Pre-mRNA-splicing factor SYF1 (PRP19-associated complex protein 90) (Synthetic lethal with CDC40 protein 1)

3D Structure

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Related Domains

Browse other domains in HAT_Syf1_CNRKL1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_Syf1_CNRKL1_C(109.4.1.890)

Pfam Families

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5GMK RCSB PDB: 5GMK PDBe: 5GMK UniProt: Q04048

Downloads

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