ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jcsq1 - ECOD Domain | ECOD

ECOD/Domains/e5jcsq1

e5jcsq1

UID: 001919218

PDB

Range: q:127-515
PDB: 5JCS chain q(all domains)
UniProt: P25382 (all domains)
Gene: RSA4

Molecule: Ribosome assembly protein 4 (Notchless protein homolog 1) (Ribosome biogenesis factor RSA4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in WD40, eIF2A, ANAPC4_WD40 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyWD40, eIF2A, ANAPC4_WD40(5.1.5.78)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

Eukaryotic translation initiation factor eIF2A

ClanCL0186Beta_propeller

PF12894ANAPC4_WD40

Anaphase-promoting complex subunit 4 WD40 domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5JCS RCSB PDB: 5JCS PDBe: 5JCS UniProt: P25382

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure