PDB 5JCS
ELECTRON MICROSCOPY0 chains67 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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2 domainsChain Oview chain
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1 domainChain Pview chain
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2 domainsChain Qview chain
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12 domainsChain Sview chain
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1 domainAll Domains (67)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5jcsa1 | a:2-149 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 2 | A | e5jcsA1 | A:99-253 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 3 | A | e5jcsA2 | A:2-98 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 4 | B | e5jcsB1 | B:2-387 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 5 | c | e5jcsc1 | c:9-105 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 6 | C | e5jcsC1 | C:2-269 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 7 | C | e5jcsC2 | C:270-362 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 8 | d | e5jcsd1 | d:4-112 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 9 | D | e5jcsD1 | D:2-297 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 10 | e | e5jcse1 | e:2-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 11 | E | e5jcsE1 | E:2-109,E:129-176 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 12 | f | e5jcsf1 | f:2-107 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 13 | F | e5jcsF1 | F:23-244 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 14 | g | e5jcsg1 | g:2-113 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 15 | G | e5jcsG1 | G:24-256 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 16 | h | e5jcsh1 | h:2-120 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 17 | H | e5jcsH1 | H:86-191 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 18 | H | e5jcsH2 | H:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 19 | i | e5jcsi1 | i:24-100 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 20 | I | e5jcsI1 | I:1-56,I:153-217 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 21 | I | e5jcsI2 | I:57-152 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 22 | j | e5jcsj1 | j:2-88 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 23 | J | e5jcsJ1 | J:6-174 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 24 | k | e5jcsk1 | k:2-78 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 25 | K | e5jcsK1 | K:12-73 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 26 | K | e5jcsK2 | K:74-138 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 27 | l | e5jcsl1 | l:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 28 | L | e5jcsL1 | L:2-194 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 29 | m | e5jcsm1 | m:1-224 | eIF-6 | 232 → 232.1 → 232.1.1 |
| 30 | M | e5jcsM1 | M:3-138 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 31 | n | e5jcsn1 | n:121-211 | RL10P_insert | 3310 → 3310.1 → 3310.1.1 |
| 32 | n | e5jcsn2 | n:25-120,n:212-236 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 33 | N | e5jcsN1 | N:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 34 | o | e5jcso1 | o:1-164 | NOG1_N | 601 → 601.30 → 601.30.1 |
| 35 | o | e5jcso2 | o:165-347 | MMR_HSR1, NOG1 | 2004 → 2004.1 → 2004.1.1 |
| 36 | O | e5jcsO1 | O:3-199 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 37 | p | e5jcsp1 | p:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 38 | P | e5jcsP1 | P:2-184 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 39 | q | e5jcsq1 | q:127-515 | WD40, eIF2A, ANAPC4_WD40 | 5 → 5.1 → 5.1.5 |
| 40 | q | e5jcsq2 | q:28-126 | NLE | 221 → 221.1 → 221.1.1 |
| 41 | Q | e5jcsQ1 | Q:2-186 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 42 | r | e5jcsr1 | r:84-318,r:340-576,r:629-700 | 109.4.1.78 | 109 → 109.4 → 109.4.1 |
| 43 | R | e5jcsR1 | R:57-189 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 44 | R | e5jcsR2 | R:2-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 45 | s | e5jcss1 | s:622-909 | 2004.1.1.2 | 2004 → 2004.1 → 2004.1.1 |
| 46 | s | e5jcss2 | s:1349-1567 | AAA_5, AAA_7 | 2004 → 2004.1 → 2004.1.1 |
| 47 | s | e5jcss3 | s:2033-2290 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 48 | s | e5jcss4 | s:1055-1221 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 49 | s | e5jcss5 | s:1664-1684,s:1720-1901 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 50 | s | e5jcss6 | s:287-464 | AAA_5, AAA_7 | 2004 → 2004.1 → 2004.1.1 |
| 51 | s | e5jcss7 | s:465-621 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 52 | s | e5jcss8 | s:2291-2416 | 148.1.3.0 | 148 → 148.1 → 148.1.3 |
| 53 | s | e5jcss9 | s:910-1024 | AAA_lid_5 | 148 → 148.1 → 148.1.3 |
| 54 | s | e5jcss10 | s:1222-1323,s:1344-1351 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 55 | s | e5jcss11 | s:1902-1988,s:2028-2032 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 56 | s | e5jcss12 | s:1564-1663 | MDN1_4th | 148 → 148.1 → 148.1.3 |
| 57 | S | e5jcsS1 | S:70-172 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 58 | S | e5jcsS2 | S:1-69 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 59 | t | e5jcst1 | t:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 60 | T | e5jcsT1 | T:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 61 | u | e5jcsu1 | u:15-109,u:129-260,u:298-326,u:463-465,u:500-558 | Peptidase_M24 | 283 → 283.1 → 283.1.1 |
| 62 | u | e5jcsu2 | u:348-394,u:416-440 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 63 | U | e5jcsU1 | U:9-108 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 64 | V | e5jcsV1 | V:2-137 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 65 | X | e5jcsX1 | X:22-142 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 66 | Y | e5jcsY1 | Y:2-127 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 67 | Z | e5jcsZ1 | Z:2-136 | Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors