ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jpqb1 - ECOD Domain | ECOD

ECOD/Domains/e5jpqb1

e5jpqb1

UID: 001920919

PDB

Range: b:15-167
PDB: 5JPQ chain b(all domains)
UniProt: G0SDL4 (all domains)
Gene: CTHT_0052200

Molecule: U3 small nucleolar ribonucleoprotein protein IMP3 (U3 small nucleolar ribonucleoprotein protein imp3)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

ECOD PDB View: 5JPQ RCSB PDB: 5JPQ PDBe: 5JPQ UniProt: G0SDL4

Downloads

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