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PDB 5JPQ

ELECTRON MICROSCOPY0 chains59 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (59)

#ChainDomain IDRangeFamilyClassification
10e5jpq010:2-149Ribosomal_S24e304 → 304.109 → 304.109.1
21e5jpq111:7-53Ribosomal_S28e2 → 2.1 → 2.1.1
3ae5jpqa1a:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
4ae5jpqa2a:929-1016RIBIOP_C1 → 1.1 → 1.1.7
5ae5jpqa3a:818-928RIBIOP_C1 → 1.1 → 1.1.8
6ae5jpqa4a:236-305,a:614-636,a:787-817AARP2CN1 → 1.1 → 1.1.7
7be5jpqb1b:15-167Ribosomal_S4,S4221 → 221.1 → 221.1.2
8ce5jpqc1c:83-274Brix7502 → 7502.1 → 7502.1.1
9de5jpqd1d:46-169Fcf12006 → 2006.1 → 2006.1.4
10ee5jpqe1e:28-252EMG12488 → 2488.1 → 2488.1.1
11fe5jpqf1f:28-252EMG12488 → 2488.1 → 2488.1.1
12ge5jpqg1g:118-209KRR1-like_KH2327 → 327.11 → 327.11.2
13ge5jpqg2g:36-117KH_8327 → 327.11 → 327.11.2
14Ge5jpqG1G:2106-3241109.4.1.0109 → 109.4 → 109.4.1
15he5jpqh1h:36-117KH_8327 → 327.11 → 327.11.2
16he5jpqh2h:118-209KRR1-like_KH2327 → 327.11 → 327.11.2
17ie5jpqi1i:10-211TmcA_N2004 → 2004.1 → 2004.1.1
18ie5jpqi2i:212-502Helicase_RecD2004 → 2004.1 → 2004.1.1
19ie5jpqi3i:503-804GNAT_acetyltr_2213 → 213.1 → 213.1.1
20ie5jpqi4i:834-934tRNA_bind_2101 → 101.1 → 101.1.1
21Ie5jpqI1I:350-684WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
22Ie5jpqI2I:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
23je5jpqj1j:10-60,j:113-211TmcA_N2004 → 2004.1 → 2004.1.1
24je5jpqj2j:834-934tRNA_bind_2101 → 101.1 → 101.1.1
25je5jpqj3j:212-227,j:259-327,j:368-432,j:469-502Helicase_RecD2004 → 2004.1 → 2004.1.1
26je5jpqj4j:503-660,j:721-804GNAT_acetyltr_2213 → 213.1 → 213.1.1
27ke5jpqk1k:18-36,k:58-88,k:232-293Ribosomal_L1898 → 898.1 → 898.1.1
28ke5jpqk2k:89-183Ribosomal_L12007 → 2007.25 → 2007.25.1
29oe5jpqo1o:15-116Ribosomal_S3Ae239 → 239.5 → 239.5.1
30oe5jpqo2o:117-229Ribosomal_S3Ae230 → 230.6 → 230.6.1
31pe5jpqp1p:2-118RS4NT221 → 221.1 → 221.1.2
32pe5jpqp2p:178-26040S_S4_C4 → 4.1 → 4.1.1
33pe5jpqp3p:119-177Ribosomal_S4e2 → 2.1 → 2.1.1
34qe5jpqq1q:39-225Ribosomal_S7167 → 167.1 → 167.1.1
35re5jpqr1r:1-235Ribosomal_S6e239 → 239.1 → 239.1.1
36se5jpqs1s:2-109Ribosomal_S7e327 → 327.10 → 327.10.1
37se5jpqs2s:110-187Ribosomal_S7e327 → 327.10 → 327.10.1
38Se5jpqS1S:135-262Nop606 → 606.1 → 606.1.1
39Se5jpqS2S:3-134Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
40Se5jpqS3S:263-377Nop102 → 102.1 → 102.1.4
41te5jpqt1t:2-208Ribosomal_S8e3174 → 3174.1 → 3174.1.1
42Te5jpqT1T:3-134Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
43Te5jpqT2T:135-262Nop606 → 606.1 → 606.1.1
44Te5jpqT3T:263-377Nop102 → 102.1 → 102.1.4
45ue5jpqu1u:21-185Ribosomal_S4,S4221 → 221.1 → 221.1.2
46Ue5jpqU1U:7-128Ribosomal_L7Ae301 → 301.1 → 301.1.1
47ve5jpqv1v:83-151Ribosomal_S15616 → 616.1 → 616.1.1
48ve5jpqv2v:35-82Ribosomal_S13_N101 → 101.40 → 101.40.1
49Ve5jpqV1V:7-128Ribosomal_L7Ae301 → 301.1 → 301.1.1
50we5jpqw1w:2-129Ribosomal_S112484 → 2484.1 → 2484.1.1
51We5jpqW1W:5-231Fibrillarin2003 → 2003.1 → 2003.1.5
52xe5jpqx1x:10-143Ribosomal_S9212 → 212.1 → 212.1.1
53Xe5jpqX1X:5-231Fibrillarin2003 → 2003.1 → 2003.1.5
54ye5jpqy1y:1-157Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
55Ye5jpqY1Y:130-361,Y:398-442,Y:474-570WD405 → 5.1 → 5.1.4
56ze5jpqz1z:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
57ze5jpqz2z:4-67Ribosomal_S8320 → 320.2 → 320.2.1
58Ze5jpqZ1Z:7-182,Z:287-361RTC328 → 328.6 → 328.6.1
59Ze5jpqZ2Z:183-287RTC_insert2485 → 2485.2 → 2485.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors