ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5mq0b1 - ECOD Domain | ECOD

ECOD/Domains/e5mq0b1

e5mq0b1

UID: 001945961

PDB

Range: b:4-55,b:75-102
PDB: 5MQ0 chain b(all domains)
UniProt: P40018 (all domains)
Gene: SMB1

Molecule: Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LSM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM(4.1.1.19)

Pfam Families

LSM domain

ClanCL0986Sm-like

External Links

ECOD PDB View: 5MQ0 RCSB PDB: 5MQ0 PDBe: 5MQ0 UniProt: P40018

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure