PDB 5MQ0
ELECTRON MICROSCOPY0 chains55 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
5 domainsChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
6 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
2 domainsChain nview chain
1 domainChain Nview chain
2 domainsChain oview chain
1 domainChain Oview chain
2 domainsChain pview chain
1 domainChain qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain tview chain
2 domainsChain Tview chain
1 domainChain uview chain
2 domainsChain vview chain
2 domainsChain Vview chain
4 domainsChain wview chain
2 domainsChain Wview chain
1 domainChain Yview chain
1 domainAll Domains (55)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5mq0a1 | a:76-188,a:222-247 | 544.1.1.0 | 544 → 544.1 → 544.1.1 |
| 2 | A | e5mq0A1 | A:127-428,A:456-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e5mq0A2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e5mq0A3 | A:1256-1575 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e5mq0A4 | A:1829-2100 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e5mq0A5 | A:1600-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 7 | b | e5mq0b1 | b:4-55,b:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | c | e5mq0c1 | c:246-342 | Slu7 | 7101 → 7101.1 → 7101.1.1 |
| 9 | C | e5mq0C1 | C:443-508,C:529-593 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 10 | C | e5mq0C2 | C:118-442 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 11 | C | e5mq0C3 | C:594-693 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 12 | C | e5mq0C4 | C:856-977 | EFG_C | 304 → 304.24 → 304.24.1 |
| 13 | C | e5mq0C5 | C:708-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 14 | C | e5mq0C6 | C:978-997 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 15 | d | e5mq0d1 | d:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | e | e5mq0e1 | e:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | f | e5mq0f1 | f:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | g | e5mq0g1 | g:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | h | e5mq0h1 | h:1-48,h:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | H | e5mq0H1 | H:11-207,H:245-249 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 21 | H | e5mq0H2 | H:250-262,H:289-481 | MA3 | 109 → 109.4 → 109.4.1 |
| 22 | j | e5mq0j1 | j:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | J | e5mq0J1 | J:135-451 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 24 | k | e5mq0k1 | k:4-55,k:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | l | e5mq0l1 | l:1-48,l:76-106 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | L | e5mq0L1 | L:2-156 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 27 | m | e5mq0m1 | m:16-108 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | M | e5mq0M1 | M:3-129 | Torus | 906 → 906.1 → 906.1.1 |
| 29 | M | e5mq0M2 | M:130-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 30 | n | e5mq0n1 | n:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | N | e5mq0N1 | N:198-266,N:288-295,N:306-324 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 32 | N | e5mq0N2 | N:4-144 | STL11_N | 376 → 376.1 → 376.1.3 |
| 33 | o | e5mq0o1 | o:155-454 | WD40 | 5 → 5.1 → 5.1.4 |
| 34 | O | e5mq0O1 | O:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 35 | O | e5mq0O2 | O:62-109,O:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 36 | p | e5mq0p1 | p:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | q | e5mq0q1 | q:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 38 | r | e5mq0r1 | r:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 39 | R | e5mq0R1 | R:2-116 | cwf21 | 6026 → 6026.1 → 6026.1.1 |
| 40 | S | e5mq0S1 | S:36-556 | HAT, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 41 | t | e5mq0t1 | t:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 42 | t | e5mq0t2 | t:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 43 | T | e5mq0T1 | T:21-163,T:196-349,T:375-790,T:1000-1017 | HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 44 | u | e5mq0u1 | u:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 45 | u | e5mq0u2 | u:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 46 | v | e5mq0v1 | v:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 47 | v | e5mq0v2 | v:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 48 | V | e5mq0V1 | V:658-833 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 49 | V | e5mq0V2 | V:834-1013 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 50 | V | e5mq0V3 | V:1014-1124 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 51 | V | e5mq0V4 | V:476-657 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 52 | w | e5mq0w1 | w:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 53 | w | e5mq0w2 | w:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 54 | W | e5mq0W1 | W:1-167 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 55 | Y | e5mq0Y1 | Y:28-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors